This database lists transcripts of the mpkCCD clone 11 cells with or without stable knockdown of the glucocorticoid receptor. The control or knockdown cells were grown and polarized on Transwell membrane in the absence of vasopressin. Total RNA was extracted and prepared for RNA-seq analysis. Transcripts with FPKM (Fragments Per Kilobase Million) > 0.3 were considered expressed in the cells. Values in the control cells (shCtrl) and glucocorticoid receptor knockdown (shGR) were standardized against median of the cells.

Number of transcripts: 20,457 (download).

Contact for questions and comments: Ming-Jiun Yu

Citation for this database: Front Physiol 2022; 10.3389/fphys.2022.816959.

Blastall Program

Blastall Database E-value cutoff

Paste sequence(s) in FASTA format.

Upload a file (txt)